Search results for "community assembly"

showing 10 items of 20 documents

Experimentally induced community assembly of polypores reveals the importance of both environmental filtering and assembly history

2019

The community assembly of wood-inhabiting fungi follows a successional pathway, with newly emerging resource patches being colonised by pioneer species, followed by those specialised on later stages of decay. The primary coloniser species have been suggested to strongly influence the assembly of the later-arriving community. We created an artificial resource pulse and studied the assembly of polypores over an 11yr period to ask how the identities of the colonising species depend on the environmental characteristics and the assembly history of the dead wood unit. Our results support the view that community assembly in fungi is a highly stochastic process, as even detailed description of the …

0106 biological sciencesArtificial resource pulseTime seriesPioneer speciesEcologyCommunity assemblyEcologyHost (biology)Ecological ModelingCommunity structurePriority effectsDead woodPlant Science15. Life on landBiology010603 evolutionary biology01 natural sciencesWood-inhabiting fungiRestoration1181 Ecology evolutionary biologySpatial aggregationTree speciesPolyporesEcology Evolution Behavior and Systematics010606 plant biology & botanyFungal Ecology
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Accounting for species interactions is necessary for predicting how arctic arthropod communities respond to climate change

2021

Species interactions are known to structure ecological communities. Still, the influence of climate change on biodiversity has primarily been evaluated by correlating individual species distributions with local climatic descriptors, then extrapolating into future climate scenarios. We ask whether predictions on arctic arthropod response to climate change can be improved by accounting for species interactions. For this, we use a 14-year-long, weekly time series from Greenland, resolved to the species level by mitogenome mapping. During the study period, temperature increased by 2 degrees C and arthropod species richness halved. We show that with abiotic variables alone, we are essentially un…

0106 biological sciencesClimate ResearchArthropodaBiodiversityClimate changeAccounting010603 evolutionary biology01 natural sciencesArcticniveljalkaisetTrophic cascade1172 Environmental sciencesEcology Evolution Behavior and SystematicsTrophic levelAbiotic componentarktinen alueEcologyfood webEcologybusiness.industry010604 marine biology & hydrobiologyeliöyhteisötilmastonmuutokset15. Life on landFood webjoint species distribution modelbiodiversiteettitrophic cascadeclimate changeGeographyArctic13. Climate actioncommunity assemblySpecies richnessbusinessravintoverkotEcography
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Ecological response hides behind the species abundance distribution : Community response to low-intensity disturbance in managed grasslands

2017

Land-use and management are disturbance factors that have diverse effects on community composition and structure. In traditional rural grasslands, such as meadows and pastures, low-intensity management is maintained to enhance biodiversity. Maintenance of road verges, in turn, creates habitat, which may complement traditional rural grasslands. To evaluate the effect of low-intensity disturbance on insect communities, we characterized species abundance distributions (SAD) for Carabidae, Formicidae, and Heteroptera in three grassland types, which differed in management: meadows, pastures, and road verges. The shape of SAD was estimated with three parameters: abundance decay rate, dominance, a…

0106 biological sciencesEnvironmental changeBiodiversityBiology010603 evolutionary biology01 natural sciencesGrasslandHeteropteraDominance (ecology)FormicidaeEcology Evolution Behavior and SystematicsRelative abundance distributionNature and Landscape ConservationOriginal Researchbiodiversitygeographygeography.geographical_feature_categoryEcologyEcology010604 marine biology & hydrobiologyroad vergeluonnon monimuotoisuusbiodiversiteettipastureHabitatta1181community assemblymeadowSpecies richnessCarabidaespecies abundance distributionsluteetTramplingEcology and Evolution
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Temporal turnover of the soil microbiome composition is guild-specific.

2021

Although spatial and temporal variation are both important components structuring microbial communities, the exact quantification of temporal turnover rates of fungi and bacteria has not been performed to date. In this study, we utilised repeated resampling of bacterial and fungal communities at specific locations across multiple years to describe their patterns and rates of temporal turnover. Our results show that microbial communities undergo temporal change at a rate of 0.010-0.025 per year (in units of Sorensen similarity), and the change in soil is slightly faster in fungi than in bacteria, with bacterial communities changing more rapidly in litter than soil. Importantly, temporal deve…

0106 biological sciencesLITTERBACTERIALSPATIAL VARIABILITYDIVERSITYBiologyFUNGAL COMMUNITIES010603 evolutionary biology01 natural sciences03 medical and health sciencesforestSoilTemporal changeMicrobiomeBacterial phylabacteriaEcology Evolution Behavior and SystematicsSCALESoil Microbiology030304 developmental biology0303 health sciencesNITROGEN DEPOSITIONECTOMYCORRHIZAL FUNGIEcologyMicrobiotaFungi15. Life on landMicrobial population biologyOAKGuild1181 Ecology evolutionary biologyLittertemporal turnovercommunity assemblyRESPONSESMycobiomeEcology lettersREFERENCES
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Community size can affect the signals of ecological drift and niche selection on biodiversity

2020

Made available in DSpace on 2020-12-12T01:24:05Z (GMT). No. of bitstreams: 0 Previous issue date: 2020-06-01 Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES) Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP) Academy of Finland Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq) Ecological drift can override the effects of deterministic niche selection on small populations and drive the assembly of some ecological communities. We tested this hypothesis with a unique data set sampled identically in 200 streams in two regions (tropical Brazil and boreal Finland) that differ in macroinvertebrate community size by fivefold. Null models allowed us t…

0106 biological sciencesMETACOMMUNITIESNichenull modelsBeta diversityBiodiversitydispersal metacommunities010603 evolutionary biology01 natural sciencesCOLONIZATIONDISPERSALCONNECTIVITYAbundance (ecology)TROPICAL STREAMbeta-diversity deviation14. Life underwaterdispersalDISTURBANCEBETA-DIVERSITYRelative species abundanceEcosystemFinlandEcology Evolution Behavior and SystematicsRESTORATIONdemographic stochasticityβ-diversity deviationvesieläimistöEcology010604 marine biology & hydrobiologySmall population sizeBiodiversitybeta diversity deviation15. Life on landBiotaluonnon monimuotoisuusbiodiversiteettiGeographyHabitat destruction13. Climate action1181 Ecology evolutionary biologySIMILARITYPATTERNShyönteisetcommunity assemblySpecies richnessaquatic insectsmetacommunitiesBrazil
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Community size affects the signals of ecological drift and niche selection on biodiversity

2019

AbstractEcological drift can override the effects of deterministic niche selection on small populations and drive the assembly of small communities. We tested the hypothesis that smaller local communities are more dissimilar among each other because of ecological drift than larger communities, which are mainly structured by niche selection. We used a unique, comprehensive dataset on insect communities sampled identically in a total of 200 streams in climatically different regions (Brazil and Finland) that differ in community size by fivefold. Null models allowed us to estimate the magnitude to which beta diversity deviates from the expectation under a random assembly process while taking di…

0106 biological sciencesMetacommunityEcology010604 marine biology & hydrobiologynull modelsNicheCommunity structureBeta diversitySmall population sizebeta diversity deviation15. Life on land010603 evolutionary biology01 natural sciencesGeographyHabitat destruction13. Climate actioncommunity assemblySpecies richnessaquatic insectsdispersalmetacommunitiesRelative species abundancedemographic stochasticity
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Which traits allow weed species to persist in grass margin strips ?

2017

EASPEGESTADINRA; Sown-grass margin strips, historically established to limit pesticide drift and soil erosion, are now also promoted for enhancing floral diversity and associated ecosystem services. To better understand weed community assembly in grass margin strips, we performed floral surveys in 75 sown-grass margin strips in two regions in France and characterized each species using information from trait databases. We hypothesized that traits of dominant species would differ between newly sown-grass margin strips and older strips. Weed species were separated into functional groups based on their traits using multiple correspondence analysis and hierarchical ascendant classification. Fun…

0106 biological sciencesfunctional group[SDV]Life Sciences [q-bio]Plant ScienceBiology010603 evolutionary biology01 natural sciencesMonocotyledonEcosystem servicesagri-environmental schemesMargin (machine learning)field marginRuderal species2. Zero hunger[ SDV ] Life Sciences [q-bio]traitEcologyfungiDicotyledonfood and beverages04 agricultural and veterinary sciences15. Life on landbiology.organism_classificationfield edgeDisturbance (ecology)040103 agronomy & agricultureTrait0401 agriculture forestry and fisheriescommunity assemblyWeedAgronomy and Crop Science
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Fire and phylogenetic structure of soil microbial communities in Mediterranean ecosystems

2017

Tesis llevada a cabo para conseguir el grado de Doctor por la Universidad de Valencia.--2018-02-21.--Sobresaliente Cum laudem

:CIENCIAS DE LA VIDA::Biología vegetal (Botánica) ::Ecología vegetal [UNESCO]UNESCO::CIENCIAS DE LA VIDA::Biología vegetal (Botánica) ::Ecología vegetalUNESCO::CIENCIAS AGRARIAS::Ciencias veterinarias ::Microbiologíaarchaeaco-occurrence networksmicrobial ecologyphylognetic diversityphylogenetic structureecosystem functioningmicrobial productivitycommunity assemblyUNESCO::CIENCIAS DE LA TIERRA Y DEL ESPACIO::Ciencias del suelo (Edafología) ::Microbiología de suelosfungi:CIENCIAS DE LA TIERRA Y DEL ESPACIO::Ciencias del suelo (Edafología) ::Microbiología de suelos [UNESCO]community structurebacteriaresilienceproteobacteria:CIENCIAS AGRARIAS::Ciencias veterinarias ::Microbiología [UNESCO]biodiversity
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Plant-animal interactions in fire-prone ecosystems

2018

SÍNTESIS Estudiar cómo responden las interacciones ecológicas a las perturbaciones es clave para abordar la creciente pérdida de biodiversidad en diferentes ecosistemas. En la Tierra existen especies que han evolucionado ante la presencia recurrente de perturbaciones naturales, como ocurre en ecosistemas con incendios frecuentes. En ellos el fuego se originó poco después de la aparición de las primeras plantas terrestres y también algunos de los patrones de incendios característicos que todavía permanecen. Sin embargo, las actividades humanas están alterando los patrones naturales de incendios, lo que puede suponer una amenaza incluso para las especies que presentan una rápida recuperación …

:CIENCIAS DE LA VIDA::Biología vegetal (Botánica) ::Ecología vegetal [UNESCO]UNESCO::CIENCIAS DE LA VIDA::Biología vegetal (Botánica) ::Ecología vegetalpollinationplant-animal interactionsforest-savanna mosaics:CIENCIAS DE LA VIDA::Biología de insectos (Entomología)::Ecología de los insectos [UNESCO]functional diversityfire-prone ecosystems:CIENCIAS DE LA VIDA [UNESCO]savannafire ecologyBrazilian CerradoMediterranean shrublandseed predationUNESCO::CIENCIAS DE LA VIDA::Biología de insectos (Entomología)::Ecología de los insectosUNESCO::CIENCIAS DE LA VIDAcommunity assemblyphylogenetic diversitywildfiresresiliencemutualisms
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The Active Human Gut Microbiota Differs from the Total Microbiota

2011

The human gut microbiota is considered one of the most fascinating reservoirs of microbial diversity hosting between 400 to 1000 bacterial species distributed among nine phyla with Firmicutes, Bacteroidetes and Actinobacteria representing around of the diversity. One of the most intriguing issues relates to understanding which microbial groups are active players in the maintenance of the microbiota homeostasis. Here, we describe the diversity of active microbial fractions compared with the whole community from raw human fecal samples. We studied four healthy volunteers by 16S rDNA gene pyrosequencing. The fractions were obtained by cell sorting based on bacterial RNA concentration. Bacteria…

Anatomy and PhysiologyPolymerase Chain ReactionFecesRNA Ribosomal 16SMolecular Cell BiologyHomeostasisCommunity AssemblyIn Situ Hybridization FluorescenceMultidisciplinaryEcologybiologyQRBiodiversityGenomicsFlow CytometryBacterial Typing TechniquesRNA BacterialCommunity EcologyMedical MicrobiologyMedicineResearch ArticleAdultFirmicutesScienceSensitivity and SpecificityMicrobiologyMicrobial EcologyMicrobiologyActinobacteriaHumansMicrobiomeBiologyCommunity StructureBacteriaClostridialesBacteroidetesBacteriologySequence Analysis DNAComparative Genomicsbiology.organism_classificationGastrointestinal TractSpecies InteractionsMetagenomicsMetagenomePyrosequencingMetagenomicsPhysiological ProcessesCytometryBacteriaPLoS ONE
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